piwheels

graftm

GraftM is a pipeline used for identifying and classifying marker gene reads from metagenomic datasets

Installation

In a virtualenv (see these instructions if you need to create one):

pip3 install graftm

Dependencies

• extern
• biopython
• jinja2
• bird-tool-utils
• pyyaml
• biom-format
• fastalite
• dendropy
• taxtastic

Releases

Version	Released	Bullseye Python 3.9	Bookworm Python 3.11	Trixie Python 3.13	Files
0.15.1	2024-07-16
graftm-0.15.1-py3-none-any.whl (202 KB)
0.15.0	2023-10-03
graftm-0.15.0-py3-none-any.whl (201 KB)
0.14.0	2022-05-12
graftm-0.14.0-py3-none-any.whl (193 KB)
0.13.1	2019-11-23
graftm-0.13.1-py3-none-any.whl (201 KB)
0.12.2	2019-03-29
graftm-0.12.2-py3-none-any.whl (192 KB)
0.12.1	2019-03-25
graftm-0.12.1-py3-none-any.whl (192 KB)
0.12.0	2019-02-24
graftm-0.12.0-py3-none-any.whl (192 KB)
0.11.1	2018-02-20
graftm-0.11.1-py3-none-any.whl (191 KB)
0.11.0	2018-02-20
graftm-0.11.0-py3-none-any.whl (191 KB)
0.10.1	2017-02-11
graftm-0.10.1-py3-none-any.whl (191 KB)
0.9.5	2016-05-17
graftm-0.9.5-py3-none-any.whl (184 KB)
0.9.4	2015-12-17
graftm-0.9.4-py3-none-any.whl (180 KB)
0.9.3	2015-12-14
graftm-0.9.3-py3-none-any.whl (179 KB)
0.9.2	2015-11-30
graftm-0.9.2-py3-none-any.whl (176 KB)
0.9.1	2015-11-19
graftm-0.9.1-py3-none-any.whl (80 KB)
0.9.0	2015-11-19
0.6.3	2015-06-29
0.6.1	2015-06-16
0.6.0	2015-06-04
0.5.4	2015-05-28
0.5.3	2015-05-24
0.5.2	2015-05-11
0.5.0	2015-05-06

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