piwheels

mgkit

Metagenomics Framework

Installation

In a virtualenv (see these instructions if you need to create one):

pip3 install mgkit

Dependencies

• pyvcf
• tqdm
• semidbm
• pymongo
• pyarrow
• future
• pysam
• pandas
• matplotlib
• msgpack-python
• networkx
• scipy
• numpy
• click
• statsmodels
• enum34
• tables
• requests

Releases

Version	Released	Bullseye Python 3.9	Bookworm Python 3.11	Trixie Python 3.13	Files
0.5.8	2021-10-27
mgkit-0.5.8-cp37-cp37m-linux_armv6l.whl (373 KB) mgkit-0.5.8-cp37-cp37m-linux_armv7l.whl (373 KB) mgkit-0.5.8-cp39-cp39-linux_armv6l.whl (380 KB) mgkit-0.5.8-cp39-cp39-linux_armv7l.whl (380 KB)
0.5.7	2021-10-25
mgkit-0.5.7-cp37-cp37m-linux_armv6l.whl (373 KB) mgkit-0.5.7-cp37-cp37m-linux_armv7l.whl (373 KB) mgkit-0.5.7-cp39-cp39-linux_armv6l.whl (380 KB) mgkit-0.5.7-cp39-cp39-linux_armv7l.whl (380 KB)
0.5.6	2021-01-29
mgkit-0.5.6-cp37-cp37m-linux_armv6l.whl (357 KB) mgkit-0.5.6-cp37-cp37m-linux_armv7l.whl (357 KB) mgkit-0.5.6-cp39-cp39-linux_armv6l.whl (364 KB) mgkit-0.5.6-cp39-cp39-linux_armv7l.whl (364 KB)
0.5.5	2020-11-19
mgkit-0.5.5-cp37-cp37m-linux_armv6l.whl (357 KB) mgkit-0.5.5-cp37-cp37m-linux_armv7l.whl (357 KB) mgkit-0.5.5-cp39-cp39-linux_armv6l.whl (364 KB) mgkit-0.5.5-cp39-cp39-linux_armv7l.whl (364 KB)
0.5.4	2020-10-23
mgkit-0.5.4-cp37-cp37m-linux_armv6l.whl (356 KB) mgkit-0.5.4-cp37-cp37m-linux_armv7l.whl (356 KB) mgkit-0.5.4-cp39-cp39-linux_armv6l.whl (363 KB) mgkit-0.5.4-cp39-cp39-linux_armv7l.whl (363 KB)
0.5.3	2020-10-19
mgkit-0.5.3-cp37-cp37m-linux_armv6l.whl (356 KB) mgkit-0.5.3-cp37-cp37m-linux_armv7l.whl (356 KB) mgkit-0.5.3-cp39-cp39-linux_armv6l.whl (363 KB) mgkit-0.5.3-cp39-cp39-linux_armv7l.whl (363 KB)
0.5.2	2020-09-18
mgkit-0.5.2-cp37-cp37m-linux_armv6l.whl (355 KB) mgkit-0.5.2-cp37-cp37m-linux_armv7l.whl (355 KB) mgkit-0.5.2-cp39-cp39-linux_armv6l.whl (362 KB) mgkit-0.5.2-cp39-cp39-linux_armv7l.whl (362 KB)
0.5.1	2020-09-16
mgkit-0.5.1-cp37-cp37m-linux_armv6l.whl (355 KB) mgkit-0.5.1-cp37-cp37m-linux_armv7l.whl (355 KB) mgkit-0.5.1-cp39-cp39-linux_armv6l.whl (362 KB) mgkit-0.5.1-cp39-cp39-linux_armv7l.whl (362 KB)
0.5.0	2020-08-28
mgkit-0.5.0-cp37-cp37m-linux_armv6l.whl (355 KB) mgkit-0.5.0-cp37-cp37m-linux_armv7l.whl (355 KB) mgkit-0.5.0-cp39-cp39-linux_armv6l.whl (362 KB) mgkit-0.5.0-cp39-cp39-linux_armv7l.whl (362 KB)
0.4.3	2020-04-20
mgkit-0.4.3-cp37-cp37m-linux_armv7l.whl (339 KB) mgkit-0.4.3-cp37-cp37m-linux_armv6l.whl (339 KB) mgkit-0.4.3-cp34-cp34m-linux_armv6l.whl (313 KB) mgkit-0.4.3-cp34-cp34m-linux_armv7l.whl (313 KB) mgkit-0.4.3-cp39-cp39-linux_armv6l.whl (346 KB) mgkit-0.4.3-cp39-cp39-linux_armv7l.whl (346 KB)
0.4.2	2020-02-05
mgkit-0.4.2-cp34-cp34m-linux_armv7l.whl (313 KB) mgkit-0.4.2-cp34-cp34m-linux_armv6l.whl (313 KB) mgkit-0.4.2-cp37-cp37m-linux_armv6l.whl (339 KB) mgkit-0.4.2-cp37-cp37m-linux_armv7l.whl (339 KB) mgkit-0.4.2-cp39-cp39-linux_armv6l.whl (346 KB) mgkit-0.4.2-cp39-cp39-linux_armv7l.whl (346 KB)
0.4.1	2019-11-08
mgkit-0.4.1-cp39-cp39-linux_armv6l.whl (343 KB) mgkit-0.4.1-cp39-cp39-linux_armv7l.whl (343 KB) mgkit-0.4.1-cp34-cp34m-linux_armv6l.whl (310 KB) mgkit-0.4.1-cp34-cp34m-linux_armv7l.whl (310 KB) mgkit-0.4.1-cp37-cp37m-linux_armv6l.whl (336 KB) mgkit-0.4.1-cp37-cp37m-linux_armv7l.whl (336 KB)
0.4.0	2019-09-09
mgkit-0.4.0-cp34-cp34m-linux_armv6l.whl (311 KB) mgkit-0.4.0-cp34-cp34m-linux_armv7l.whl (311 KB)
0.3.4	2018-05-22
mgkit-0.3.4-cp34-cp34m-linux_armv7l.whl (307 KB) mgkit-0.3.4-cp34-cp34m-linux_armv6l.whl (307 KB) mgkit-0.3.4-cp35-cp35m-linux_armv7l.whl (300 KB) mgkit-0.3.4-cp35-cp35m-linux_armv6l.whl (300 KB)
0.3.3	2018-04-23
mgkit-0.3.3-cp34-cp34m-linux_armv7l.whl (320 KB) mgkit-0.3.3-cp34-cp34m-linux_armv6l.whl (320 KB) mgkit-0.3.3-cp35-cp35m-linux_armv7l.whl (313 KB) mgkit-0.3.3-cp35-cp35m-linux_armv6l.whl (313 KB)
0.3.2	2017-09-13
mgkit-0.3.2-cp34-cp34m-linux_armv7l.whl (327 KB) mgkit-0.3.2-cp35-cp35m-linux_armv7l.whl (320 KB) mgkit-0.3.2-cp35-cp35m-linux_armv6l.whl (320 KB)
0.3.0	2016-09-27
mgkit-0.3.0-py3-none-any.whl (179 KB)
0.2.5	2016-04-14
mgkit-0.2.5-py3-none-any.whl (168 KB)
0.2.4	2016-02-22
mgkit-0.2.4-py3-none-any.whl (163 KB)
0.2.3	2016-02-06
mgkit-0.2.3-py3-none-any.whl (169 KB)
0.2.2	2016-01-08
mgkit-0.2.2-py3-none-any.whl (157 KB)
0.2.1	2015-12-04
mgkit-0.2.1-py3-none-any.whl (155 KB)
0.2.0	2015-09-30
mgkit-0.2.0-py2.py3-none-any.whl (167 KB)
0.1.16	2015-04-03
mgkit-0.1.16-py2.py3-none-any.whl (183 KB)
0.1.15	2015-02-18
mgkit-0.1.15-py3-none-any.whl (173 KB)
0.1.14	2015-01-23
mgkit-0.1.14-py3-none-any.whl (165 KB)
0.1.13	2014-09-25
mgkit-0.1.13-py3-none-any.whl (157 KB)
0.1.12	2014-07-08
mgkit-0.1.12-py3-none-any.whl (129 KB)
0.1.11	2014-03-21
mgkit-0.1.11-py3-none-any.whl (108 KB)
0.1.10	2014-03-05
mgkit-0.1.10-py3-none-any.whl (108 KB)

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