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CASSIA

CASSIA (Cell type Annotation using Specialized System with Integrated AI) is a Python package for automated cell type annotation in single-cell RNA sequencing data using large language models.

Installation

In a virtualenv (see these instructions if you need to create one):

pip3 install cassia

Dependencies

• mygene
• seaborn
• matplotlib
• anthropic
• numpy
• openai
• pandas
• requests

Releases

Version	Released	Bookworm Python 3.11	Trixie Python 3.13	Files
1.4.0	2026-09-10
cassia-1.4.0-py3-none-any.whl (2 MB)
1.3.9	2026-05-18
cassia-1.3.9-py3-none-any.whl (2 MB)
1.3.8	2026-04-14
cassia-1.3.8-py3-none-any.whl (2 MB)
1.3.7	2026-04-08
cassia-1.3.7-py3-none-any.whl (2 MB)
1.3.6	2026-04-08
cassia-1.3.6-py3-none-any.whl (2 MB)
1.3.5	2026-04-08
cassia-1.3.5-py3-none-any.whl (2 MB)
1.3.3	2026-03-23
cassia-1.3.3-py3-none-any.whl (2 MB)
1.3.2	2026-03-23
cassia-1.3.2-py3-none-any.whl (2 MB)
1.3.1	2026-03-23
cassia-1.3.1-py3-none-any.whl (2 MB)
1.3.0	2026-03-23
cassia-1.3.0-py3-none-any.whl (2 MB)
0.3.18	2025-12-13
cassia-0.3.18-py3-none-any.whl (1 MB)
0.3.17	2025-12-12
cassia-0.3.17-py3-none-any.whl (1 MB)
0.3.16	2025-12-12
cassia-0.3.16-py3-none-any.whl (1 MB)
0.3.14	2025-12-07
cassia-0.3.14-py3-none-any.whl (1 MB)
0.3.13	2025-12-07
cassia-0.3.13-py3-none-any.whl (1 MB)
0.3.12	2025-12-06
cassia-0.3.12-py3-none-any.whl (1 MB)
0.3.11	2025-12-06
cassia-0.3.11-py3-none-any.whl (1 MB)
0.3.10	2025-12-06
cassia-0.3.10-py3-none-any.whl (1 MB)
0.3.9	2025-12-04
cassia-0.3.9-py3-none-any.whl (1 MB)
0.3.8	2025-12-04
cassia-0.3.8-py3-none-any.whl (1 MB)
0.3.7	2025-12-03
cassia-0.3.7-py3-none-any.whl (1 MB)
0.3.6	2025-12-03
cassia-0.3.6-py3-none-any.whl (1 MB)
0.3.5	2025-12-03
cassia-0.3.5-py3-none-any.whl (1 MB)
0.3.4	2025-12-03
cassia-0.3.4-py3-none-any.whl (1 MB)
0.3.3	2025-12-03
cassia-0.3.3-py3-none-any.whl (1 MB)
0.3.2	2025-12-02
cassia-0.3.2-py3-none-any.whl (1 MB)
0.3.1	2025-12-02
cassia-0.3.1-py3-none-any.whl (1 MB)
0.3.1.dev5 pre-release	2025-11-30
cassia-0.3.1.dev5-py3-none-any.whl (1 MB)
0.2.0	2025-04-20
0.1.9	2024-12-03
CASSIA-0.1.9-py3-none-any.whl (1 MB)
0.1.8	2024-12-03
CASSIA-0.1.8-py3-none-any.whl (1 MB)
0.1.7	2024-12-02
CASSIA-0.1.7-py3-none-any.whl (40 KB)
0.1.6	2024-11-24
CASSIA-0.1.6-py3-none-any.whl (32 KB)
0.1.5	2024-11-24
CASSIA-0.1.5-py3-none-any.whl (32 KB)
0.1.4	2024-11-24
CASSIA-0.1.4-py3-none-any.whl (32 KB)
0.1.3	2024-11-24
CASSIA-0.1.3-py3-none-any.whl (32 KB)
0.1.2	2024-11-24
CASSIA-0.1.2-py3-none-any.whl (32 KB)
0.1.1	2024-11-24
CASSIA-0.1.1-py3-none-any.whl (32 KB)
0.1	2024-11-23
CASSIA-0.1-py3-none-any.whl (1 KB)

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