piwheels

topiary

Predict, filter, and rank MHC-presented peptides from any antigen source

Installation

In a virtualenv (see these instructions if you need to create one):

pip3 install topiary

Dependencies

• varcode
• weirdo
• packaging
• mhctools
• pyarrow
• pirlygenes
• osteosarc
• mhcgnomes
• numpy
• pandas
• gtfparse
• argcomplete
• isovar
• pyensembl
• oncoref

Releases

Version	Released	Bookworm Python 3.11	Trixie Python 3.13	Files
5.113.1	2026-11-11
5.113.0	2026-11-11
5.112.0	2026-11-10
topiary-5.112.0-py3-none-any.whl (404 KB)
5.111.9	2026-11-09
topiary-5.111.9-py3-none-any.whl (402 KB)
5.111.7	2026-11-09
topiary-5.111.7-py3-none-any.whl (397 KB)
5.111.6	2026-11-09
topiary-5.111.6-py3-none-any.whl (397 KB)
5.111.5	2026-11-09
topiary-5.111.5-py3-none-any.whl (396 KB)
5.111.4	2026-11-09
topiary-5.111.4-py3-none-any.whl (395 KB)
5.111.3	2026-11-06
topiary-5.111.3-py3-none-any.whl (394 KB)
5.111.0	2026-11-05
topiary-5.111.0-py3-none-any.whl (394 KB)
5.110.2	2026-11-05
topiary-5.110.2-py3-none-any.whl (389 KB)
5.110.0	2026-11-03
topiary-5.110.0-py3-none-any.whl (389 KB)
5.109.0	2026-10-31
topiary-5.109.0-py3-none-any.whl (387 KB)
5.108.4	2026-10-30
topiary-5.108.4-py3-none-any.whl (385 KB)
5.108.3	2026-10-29
topiary-5.108.3-py3-none-any.whl (385 KB)
5.108.2	2026-10-29
topiary-5.108.2-py3-none-any.whl (385 KB)
5.108.1	2026-10-29
topiary-5.108.1-py3-none-any.whl (385 KB)
5.108.0	2026-10-29
topiary-5.108.0-py3-none-any.whl (385 KB)
5.107.1	2026-10-29
topiary-5.107.1-py3-none-any.whl (383 KB)
5.107.0	2026-10-29
topiary-5.107.0-py3-none-any.whl (382 KB)
5.106.1	2026-10-29
topiary-5.106.1-py3-none-any.whl (382 KB)
5.106.0	2026-10-29
topiary-5.106.0-py3-none-any.whl (382 KB)
5.105.0	2026-10-29
topiary-5.105.0-py3-none-any.whl (381 KB)
5.104.0	2026-10-28
topiary-5.104.0-py3-none-any.whl (380 KB)
5.103.0	2026-10-28
topiary-5.103.0-py3-none-any.whl (376 KB)
5.102.0	2026-10-28
topiary-5.102.0-py3-none-any.whl (374 KB)
5.101.0	2026-10-28
topiary-5.101.0-py3-none-any.whl (370 KB)
5.100.3	2026-10-28
topiary-5.100.3-py3-none-any.whl (370 KB)
5.100.2	2026-10-28
topiary-5.100.2-py3-none-any.whl (370 KB)
5.100.1	2026-10-28
topiary-5.100.1-py3-none-any.whl (370 KB)
5.100.0	2026-10-28
topiary-5.100.0-py3-none-any.whl (370 KB)
5.99.1	2026-10-28
topiary-5.99.1-py3-none-any.whl (369 KB)
5.99.0	2026-10-28
topiary-5.99.0-py3-none-any.whl (369 KB)
5.98.1	2026-10-28
topiary-5.98.1-py3-none-any.whl (369 KB)
5.97.0	2026-10-25
topiary-5.97.0-py3-none-any.whl (367 KB)
5.96.0	2026-10-25
topiary-5.96.0-py3-none-any.whl (363 KB)
5.95.3	2026-10-25
topiary-5.95.3-py3-none-any.whl (355 KB)
5.95.1	2026-10-24
topiary-5.95.1-py3-none-any.whl (355 KB)
5.95.0	2026-10-22
topiary-5.95.0-py3-none-any.whl (354 KB)
5.94.8	2026-10-21
topiary-5.94.8-py3-none-any.whl (354 KB)
5.94.6	2026-10-20
topiary-5.94.6-py3-none-any.whl (354 KB)
5.94.5	2026-10-14
topiary-5.94.5-py3-none-any.whl (354 KB)
5.94.4	2026-10-08
topiary-5.94.4-py3-none-any.whl (360 KB)
5.94.3	2026-10-07
topiary-5.94.3-py3-none-any.whl (359 KB)
5.94.2	2026-10-06
topiary-5.94.2-py3-none-any.whl (359 KB)
5.94.1	2026-10-06
topiary-5.94.1-py3-none-any.whl (359 KB)
5.94.0	2026-10-06
topiary-5.94.0-py3-none-any.whl (359 KB)
5.93.6	2026-10-06
topiary-5.93.6-py3-none-any.whl (356 KB)
5.93.4	2026-10-06
topiary-5.93.4-py3-none-any.whl (355 KB)
5.93.3	2026-10-06
topiary-5.93.3-py3-none-any.whl (355 KB)
5.93.2	2026-10-05
topiary-5.93.2-py3-none-any.whl (355 KB)
5.93.1	2026-10-05
topiary-5.93.1-py3-none-any.whl (354 KB)
5.93.0	2026-10-02
topiary-5.93.0-py3-none-any.whl (352 KB)
5.92.0	2026-10-02
topiary-5.92.0-py3-none-any.whl (345 KB)
5.91.0	2026-10-02
topiary-5.91.0-py3-none-any.whl (340 KB)
5.90.0	2026-10-01
topiary-5.90.0-py3-none-any.whl (333 KB)
5.89.0	2026-10-01
topiary-5.89.0-py3-none-any.whl (319 KB)
5.88.1	2026-09-30
topiary-5.88.1-py3-none-any.whl (314 KB)
5.88.0	2026-09-29
topiary-5.88.0-py3-none-any.whl (314 KB)
5.87.0	2026-09-29
topiary-5.87.0-py3-none-any.whl (307 KB)
5.86.2	2026-09-29
topiary-5.86.2-py3-none-any.whl (301 KB)
5.86.1	2026-09-28
topiary-5.86.1-py3-none-any.whl (301 KB)
5.86.0	2026-09-28
topiary-5.86.0-py3-none-any.whl (301 KB)
5.85.1	2026-09-28
topiary-5.85.1-py3-none-any.whl (299 KB)
5.85.0	2026-09-28
topiary-5.85.0-py3-none-any.whl (299 KB)
5.84.3	2026-09-28
topiary-5.84.3-py3-none-any.whl (301 KB)
5.84.2	2026-09-28
topiary-5.84.2-py3-none-any.whl (301 KB)
5.84.1	2026-09-28
topiary-5.84.1-py3-none-any.whl (301 KB)
5.84.0	2026-09-28
topiary-5.84.0-py3-none-any.whl (300 KB)
5.83.0	2026-09-27
topiary-5.83.0-py3-none-any.whl (299 KB)
5.82.0	2026-09-27
topiary-5.82.0-py3-none-any.whl (297 KB)
5.81.0	2026-09-27
topiary-5.81.0-py3-none-any.whl (297 KB)
5.80.0	2026-09-27
topiary-5.80.0-py3-none-any.whl (295 KB)
5.79.0	2026-09-27
topiary-5.79.0-py3-none-any.whl (294 KB)
5.78.0	2026-09-27
topiary-5.78.0-py3-none-any.whl (294 KB)
5.77.0	2026-09-26
topiary-5.77.0-py3-none-any.whl (293 KB)
5.76.0	2026-09-26
topiary-5.76.0-py3-none-any.whl (293 KB)
5.75.0	2026-09-26
topiary-5.75.0-py3-none-any.whl (293 KB)
5.74.0	2026-09-26
topiary-5.74.0-py3-none-any.whl (293 KB)
5.73.0	2026-09-26
topiary-5.73.0-py3-none-any.whl (293 KB)
5.72.0	2026-09-26
topiary-5.72.0-py3-none-any.whl (293 KB)
5.71.3	2026-09-25
topiary-5.71.3-py3-none-any.whl (293 KB)
5.71.2	2026-09-25
topiary-5.71.2-py3-none-any.whl (292 KB)
5.71.1	2026-09-25
topiary-5.71.1-py3-none-any.whl (290 KB)
5.70.2	2026-09-24
topiary-5.70.2-py3-none-any.whl (286 KB)
5.70.1	2026-09-24
topiary-5.70.1-py3-none-any.whl (285 KB)
5.70.0	2026-09-23
topiary-5.70.0-py3-none-any.whl (284 KB)
5.69.0	2026-09-23
topiary-5.69.0-py3-none-any.whl (278 KB)
5.68.4	2026-09-23
topiary-5.68.4-py3-none-any.whl (275 KB)
5.68.3	2026-09-23
topiary-5.68.3-py3-none-any.whl (276 KB)
5.68.2	2026-09-22
topiary-5.68.2-py3-none-any.whl (272 KB)
5.68.1	2026-09-22
topiary-5.68.1-py3-none-any.whl (271 KB)
5.68.0	2026-09-22
topiary-5.68.0-py3-none-any.whl (271 KB)
5.67.1	2026-09-21
topiary-5.67.1-py3-none-any.whl (262 KB)
5.67.0	2026-09-20
topiary-5.67.0-py3-none-any.whl (262 KB)
5.66.0	2026-09-20
topiary-5.66.0-py3-none-any.whl (262 KB)
5.65.2	2026-09-20
topiary-5.65.2-py3-none-any.whl (262 KB)
5.65.1	2026-09-19
topiary-5.65.1-py3-none-any.whl (262 KB)
5.65.0	2026-09-19
topiary-5.65.0-py3-none-any.whl (261 KB)
5.64.0	2026-09-19
topiary-5.64.0-py3-none-any.whl (259 KB)
5.63.0	2026-09-18
topiary-5.63.0-py3-none-any.whl (258 KB)
5.62.0	2026-09-18
topiary-5.62.0-py3-none-any.whl (253 KB)
5.61.0	2026-09-17
topiary-5.61.0-py3-none-any.whl (252 KB)
5.60.3	2026-09-17
topiary-5.60.3-py3-none-any.whl (250 KB)
5.60.2	2026-09-17
topiary-5.60.2-py3-none-any.whl (250 KB)
5.60.1	2026-09-17
topiary-5.60.1-py3-none-any.whl (250 KB)
5.60.0	2026-09-17
topiary-5.60.0-py3-none-any.whl (250 KB)
5.59.2	2026-09-16
topiary-5.59.2-py3-none-any.whl (250 KB)
5.59.1	2026-09-16
topiary-5.59.1-py3-none-any.whl (249 KB)
5.59.0	2026-09-16
topiary-5.59.0-py3-none-any.whl (248 KB)
5.58.0	2026-09-15
topiary-5.58.0-py3-none-any.whl (246 KB)
5.57.0	2026-09-15
topiary-5.57.0-py3-none-any.whl (245 KB)
5.56.1	2026-09-14
topiary-5.56.1-py3-none-any.whl (244 KB)
5.55.1	2026-09-11
topiary-5.55.1-py3-none-any.whl (242 KB)
5.53.0	2026-09-09
topiary-5.53.0-py3-none-any.whl (233 KB)
5.52.10	2026-09-08
topiary-5.52.10-py3-none-any.whl (230 KB)
5.52.9	2026-09-07
topiary-5.52.9-py3-none-any.whl (230 KB)
5.52.8	2026-09-07
topiary-5.52.8-py3-none-any.whl (229 KB)
5.52.7	2026-09-06
topiary-5.52.7-py3-none-any.whl (555 KB)
5.52.6	2026-09-05
topiary-5.52.6-py3-none-any.whl (553 KB)
5.52.5	2026-09-05
topiary-5.52.5-py3-none-any.whl (551 KB)
5.52.4	2026-09-04
topiary-5.52.4-py3-none-any.whl (548 KB)
5.52.3	2026-09-04
topiary-5.52.3-py3-none-any.whl (546 KB)
5.52.2	2026-09-04
topiary-5.52.2-py3-none-any.whl (546 KB)
5.52.1	2026-09-04
topiary-5.52.1-py3-none-any.whl (542 KB)
5.52.0	2026-09-04
topiary-5.52.0-py3-none-any.whl (541 KB)
5.51.0	2026-09-03
topiary-5.51.0-py3-none-any.whl (528 KB)
5.49.1	2026-09-03
topiary-5.49.1-py3-none-any.whl (525 KB)
5.49.0	2026-09-03
topiary-5.49.0-py3-none-any.whl (524 KB)
5.48.1	2026-09-02
topiary-5.48.1-py3-none-any.whl (518 KB)
5.48.0	2026-09-02
topiary-5.48.0-py3-none-any.whl (518 KB)
5.47.0	2026-09-01
topiary-5.47.0-py3-none-any.whl (502 KB)
5.46.0	2026-09-01
topiary-5.46.0-py3-none-any.whl (494 KB)
5.45.1	2026-09-01
topiary-5.45.1-py3-none-any.whl (432 KB)
5.45.0	2026-09-01
topiary-5.45.0-py3-none-any.whl (432 KB)
5.44.0	2026-09-01
topiary-5.44.0-py3-none-any.whl (432 KB)
5.43.0	2026-09-01
topiary-5.43.0-py3-none-any.whl (429 KB)
5.42.0	2026-09-01
topiary-5.42.0-py3-none-any.whl (426 KB)
5.41.0	2026-09-01
topiary-5.41.0-py3-none-any.whl (424 KB)
5.40.0	2026-09-01
topiary-5.40.0-py3-none-any.whl (422 KB)
5.39.1	2026-09-01
topiary-5.39.1-py3-none-any.whl (416 KB)
5.39.0	2026-09-01
topiary-5.39.0-py3-none-any.whl (413 KB)
5.38.0	2026-09-01
topiary-5.38.0-py3-none-any.whl (408 KB)
5.37.0	2026-08-31
topiary-5.37.0-py3-none-any.whl (401 KB)
5.36.0	2026-08-31
topiary-5.36.0-py3-none-any.whl (394 KB)
5.35.1	2026-08-31
topiary-5.35.1-py3-none-any.whl (391 KB)
5.35.0	2026-08-31
topiary-5.35.0-py3-none-any.whl (389 KB)
5.34.0	2026-08-31
topiary-5.34.0-py3-none-any.whl (382 KB)
5.33.0	2026-08-31
topiary-5.33.0-py3-none-any.whl (379 KB)
5.32.0	2026-08-31
topiary-5.32.0-py3-none-any.whl (374 KB)
5.31.1	2026-08-31
topiary-5.31.1-py3-none-any.whl (369 KB)
5.31.0	2026-08-31
topiary-5.31.0-py3-none-any.whl (367 KB)
5.30.0	2026-08-31
topiary-5.30.0-py3-none-any.whl (361 KB)
5.29.0	2026-08-31
topiary-5.29.0-py3-none-any.whl (355 KB)
5.28.2	2026-08-31
topiary-5.28.2-py3-none-any.whl (349 KB)
5.28.0	2026-08-31
topiary-5.28.0-py3-none-any.whl (342 KB)
5.27.0	2026-08-31
topiary-5.27.0-py3-none-any.whl (340 KB)
5.26.0	2026-08-29
topiary-5.26.0-py3-none-any.whl (338 KB)
5.22.0	2026-08-29
topiary-5.22.0-py3-none-any.whl (327 KB)
5.21.1	2026-08-28
topiary-5.21.1-py3-none-any.whl (322 KB)
5.21.0	2026-08-28
topiary-5.21.0-py3-none-any.whl (320 KB)
5.20.1	2026-08-27
topiary-5.20.1-py3-none-any.whl (314 KB)
5.20.0	2026-08-27
topiary-5.20.0-py3-none-any.whl (313 KB)
5.19.0	2026-08-27
topiary-5.19.0-py3-none-any.whl (312 KB)
5.18.1	2026-08-27
topiary-5.18.1-py3-none-any.whl (308 KB)
5.18.0	2026-08-26
topiary-5.18.0-py3-none-any.whl (305 KB)
5.17.1	2026-08-26
topiary-5.17.1-py3-none-any.whl (297 KB)
5.16.2	2026-05-18
topiary-5.16.2-py3-none-any.whl (289 KB)
5.16.1	2026-05-15
topiary-5.16.1-py3-none-any.whl (276 KB)
5.15.0	2026-05-13
topiary-5.15.0-py3-none-any.whl (258 KB)
5.14.1	2026-05-11
topiary-5.14.1-py3-none-any.whl (256 KB)
5.14.0	2026-05-11
topiary-5.14.0-py3-none-any.whl (256 KB)
5.13.0	2026-05-11
topiary-5.13.0-py3-none-any.whl (253 KB)
5.12.0	2026-05-09
topiary-5.12.0-py3-none-any.whl (246 KB)
5.11.0	2026-05-08
topiary-5.11.0-py3-none-any.whl (245 KB)
5.10.8	2026-05-06
topiary-5.10.8-py3-none-any.whl (242 KB)
5.10.7	2026-05-06
topiary-5.10.7-py3-none-any.whl (243 KB)
5.10.6	2026-05-06
topiary-5.10.6-py3-none-any.whl (242 KB)
5.10.5	2026-05-05
topiary-5.10.5-py3-none-any.whl (241 KB)
5.10.4	2026-05-05
topiary-5.10.4-py3-none-any.whl (241 KB)
5.10.3	2026-05-05
topiary-5.10.3-py3-none-any.whl (240 KB)
5.10.2	2026-05-05
topiary-5.10.2-py3-none-any.whl (239 KB)
5.10.1	2026-04-30
topiary-5.10.1-py3-none-any.whl (234 KB)
5.10.0	2026-04-24
topiary-5.10.0-py3-none-any.whl (233 KB)
5.9.1	2026-04-18
topiary-5.9.1-py3-none-any.whl (225 KB)
5.9.0	2026-04-16
topiary-5.9.0-py3-none-any.whl (225 KB)
5.8.0	2026-04-16
topiary-5.8.0-py3-none-any.whl (220 KB)
5.7.0	2026-04-16
topiary-5.7.0-py3-none-any.whl (211 KB)
5.6.0	2026-04-15
topiary-5.6.0-py3-none-any.whl (198 KB)
5.5.0	2026-04-14
topiary-5.5.0-py3-none-any.whl (193 KB)
5.4.0	2026-04-14
topiary-5.4.0-py3-none-any.whl (182 KB)
5.2.0	2026-04-13
topiary-5.2.0-py3-none-any.whl (171 KB)
5.1.0	2026-04-13
topiary-5.1.0-py3-none-any.whl (156 KB)
5.0.1	2026-04-12
topiary-5.0.1-py3-none-any.whl (147 KB)
5.0.0	2026-04-12
topiary-5.0.0-py3-none-any.whl (147 KB)
4.12.0	2026-04-12
topiary-4.12.0-py3-none-any.whl (141 KB)
4.11.2	2026-04-12
topiary-4.11.2-py3-none-any.whl (131 KB)
4.11.1	2026-04-11
topiary-4.11.1-py3-none-any.whl (131 KB)
4.11.0	2026-04-11
topiary-4.11.0-py3-none-any.whl (131 KB)
4.10.0	2026-04-11
topiary-4.10.0-py3-none-any.whl (120 KB)
4.9.0	2026-04-11
topiary-4.9.0-py3-none-any.whl (114 KB)
4.8.0	2026-04-10
topiary-4.8.0-py3-none-any.whl (101 KB)
4.7.0	2026-04-10
topiary-4.7.0-py3-none-any.whl (104 KB)
4.6.0	2026-04-09
topiary-4.6.0-py3-none-any.whl (91 KB)
4.5.1	2026-04-09
topiary-4.5.1-py3-none-any.whl (88 KB)
4.5.0	2026-04-09
topiary-4.5.0-py3-none-any.whl (85 KB)
4.4.0	2026-04-09
topiary-4.4.0-py3-none-any.whl (76 KB)
4.3.2	2026-04-09
topiary-4.3.2-py3-none-any.whl (73 KB)
4.3.1	2026-04-09
topiary-4.3.1-py3-none-any.whl (72 KB)
4.3.0	2026-04-09
topiary-4.3.0-py3-none-any.whl (71 KB)
4.2.1	2026-04-08
topiary-4.2.1-py3-none-any.whl (50 KB)
4.2.0	2026-04-08
topiary-4.2.0-py3-none-any.whl (49 KB)
4.1.0	2026-04-07
topiary-4.1.0-py3-none-any.whl (44 KB)
4.0.1	2026-04-07
topiary-4.0.1-py3-none-any.whl (40 KB)
4.0.0	2026-04-07
topiary-4.0.0-py3-none-any.whl (40 KB)
3.0.6	2018-02-26
topiary-3.0.6-py3-none-any.whl (40 KB)
3.0.2	2018-02-21
topiary-3.0.2-py3-none-any.whl (35 KB)
3.0.0	2018-01-19
topiary-3.0.0-py3-none-any.whl (33 KB)
2.2.0	2018-01-12
topiary-2.2.0-py3-none-any.whl (40 KB)
2.1.0	2017-12-21
topiary-2.1.0-py3-none-any.whl (39 KB)
2.0.0	2017-11-08
topiary-2.0.0-py3-none-any.whl (39 KB)
1.2.1	2017-05-04
topiary-1.2.1-py3-none-any.whl (39 KB)
1.2.0	2017-03-28
topiary-1.2.0-py3-none-any.whl (39 KB)
0.1.2	2017-03-01
topiary-0.1.2-py3-none-any.whl (38 KB)
0.1.1	2017-03-01
0.1.0	2016-08-06
topiary-0.1.0-py3-none-any.whl (38 KB)
0.0.21	2016-06-16
topiary-0.0.21-py3-none-any.whl (44 KB)
0.0.20	2016-06-10
topiary-0.0.20-py3-none-any.whl (44 KB)
0.0.19	2016-05-27
topiary-0.0.19-py3-none-any.whl (37 KB)
0.0.18	2016-05-26
topiary-0.0.18-py3-none-any.whl (37 KB)
0.0.17	2016-05-13
topiary-0.0.17-py3-none-any.whl (37 KB)
0.0.16	2016-05-10
topiary-0.0.16-py3-none-any.whl (37 KB)
0.0.15	2016-03-15
topiary-0.0.15-py3-none-any.whl (37 KB)
0.0.14	2015-10-27
topiary-0.0.14-py3-none-any.whl (35 KB)
0.0.13	2015-08-28
topiary-0.0.13-py3-none-any.whl (21 KB)
0.0.10	2015-08-25
topiary-0.0.10-py3-none-any.whl (23 KB)
0.0.9	2015-08-24
topiary-0.0.9-py3-none-any.whl (21 KB)
0.0.8	2015-08-24
topiary-0.0.8-py3-none-any.whl (21 KB)
0.0.7	2015-05-04
topiary-0.0.7-py3-none-any.whl (20 KB)
0.0.6	2015-05-02
topiary-0.0.6-py3-none-any.whl (13 KB)
0.0.5	2015-05-01
topiary-0.0.5-py3-none-any.whl (13 KB)
0.0.4	2015-05-01
topiary-0.0.4-py3-none-any.whl (13 KB)
0.0.3	2015-05-01
topiary-0.0.3-py3-none-any.whl (12 KB)
0.0.2	2015-05-01
topiary-0.0.2-py3-none-any.whl (12 KB)
0.0.1	2015-05-01
topiary-0.0.1-py3-none-any.whl (12 KB)
0.0.0	2015-04-30
topiary-0.0.0-py3-none-any.whl (12 KB)

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