gtdbtk

A toolkit for assigning objective taxonomic classifications to bacterial and archaeal genomes.

Installation

In a virtualenv (see these instructions if you need to create one):

pip3 install gtdbtk

Dependencies

Releases

Version Released Bullseye
Python 3.9
Bookworm
Python 3.11
Trixie
Python 3.13
Files
2.5.2 2025-09-12      
2.5.1 2025-09-09      
2.5.0 2025-09-08      
2.4.1 2025-04-18      
2.4.0 2024-04-24    
2.3.2 2023-07-05  
2.3.0 2023-05-09  
2.2.6 2023-03-23  
2.2.5 2023-03-16  
2.2.4 2023-02-28  
2.2.3 2023-02-15  
2.2.2 2023-02-14  
2.2.1 2023-02-14  
2.2.0 2023-02-14      
2.1.1 2022-07-11  
2.1.0 2022-05-12  
2.0.0 2022-04-08  
1.7.0 2021-10-15  
1.6.0 2021-08-20  
1.5.1 2021-06-24  
1.5.0 2021-04-26  
1.4.1 2021-02-03  
1.4.0 2020-11-30  
1.3.0 2020-07-18  
1.2.0 2020-05-29  
1.1.1 2020-04-22  
1.1.0 2020-04-14  
1.0.2 2019-12-12  
1.0.1 2019-12-05  
1.0.0 2019-12-05  
0.3.3 2019-11-15  
0.3.2 2019-07-12  
0.3.1 2019-07-08  
0.3.0 2019-06-21  
0.2.2 2019-03-18  
0.2.1 2019-03-08  
0.1.6 2019-01-14  
0.1.3 2018-09-21  
0.1.2 2018-09-18  
0.1.1 2018-08-30  
0.1.0 2018-08-30  
0.0.8b1 pre-release 2018-06-20  
0.0.7 2018-04-19  
0.0.6 2018-04-19  
0.0.5 2018-03-16  
0.0.4b3 pre-release 2018-03-08  
0.0.4b2 pre-release 2018-03-08  
0.0.4b1 pre-release 2018-03-01  
0.0.4b0 pre-release 2018-02-28  
0.0.3 2018-02-27  
0.0.2 2018-02-27  
0.0.1 2017-08-22  

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Page last updated 2025-09-17 00:40:23 UTC